To what extent does freezing impact the mid-infrared signature of urine? Case of patients attending urology department.

Fiche publication

Date publication

décembre 2023

Journal

Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy

Auteurs

Membres identifiés du Cancéropôle Est :
Pr PIOT Olivier

Tous les auteurs :
Oudahmane I, Sarkees E, Taha F, Vanmansart J, Vuiblet V, Larre S, Piot O

Lien Pubmed

https://www.ncbi.nlm.nih.gov/pubmed/38168660

Résumé

Urine is a very interesting and attractive biofluid for biomarker discovery and medical diagnosis research due to its non-invasiveness collection and richness of potential biomarkers. Fourier-Transform Infrared (FTIR) spectroscopy applied on urine samples is a promising tool that could be used as a screening method for various diseases. However, during method development, frozen urine is more accessible, especially for inter-laboratory studies, whereas in routine application fresh urine is more convenient. Here, the objective of our work is to evaluate the freezing impact on mid-infrared signature of urine samples. Therefore, both fresh and frozen urine samples from twenty patients were analysed in a dried form. These samples were collected from patients consulting for cystoscopy examination. Simultaneously, centrifugation was also conducted on 10 of all included patients. Principal component analysis (PCA) revealed that patient inter-variabilities are higher than variability due to the freezing step. Then, Euclidean distance between fresh and frozen urine of each patient highlighted that the impact of freezing is different from one patient to another. Adding the centrifugation step slightly minimized intra-patient variability compared to not centrifugated samples. This study contributes to define experimental conditions for urine analysis development for translational application in biomedical field.