MultiRNAflow: integrated analysis of temporal RNA-seq data with multiple biological conditions.
Fiche publication
Date publication
mai 2024
Journal
Bioinformatics (Oxford, England)
Auteurs
Membres identifiés du Cancéropôle Est :
Dr VALLAT Laurent, Dr CHAMPAGNAT Nicolas, Pr VALLOIS Pierre
Tous les auteurs :
Loubaton R, Champagnat N, Vallois P, Vallat L
Lien Pubmed
Résumé
The dynamic transcriptional mechanisms that govern eukaryotic cell function can now be analyzed by RNA sequencing (RNAseq). However, the packages currently available for the analysis of raw sequencing data do not provide automatic analysis of complex experimental designs with multiple biological conditions and multiple analysis time-points.
Mots clés
RNAseq, complex experimental design, integrated data analysis, multiple temporal and biological conditions
Référence
Bioinformatics. 2024 05 29;40(5):